Public Member Functions
	BasepairState (Point const &d, Matrix const &r, Points const &sugars)

	BasepairState (BasepairState const &b)

BasepairState	copy () const

void	calculate_r_T ()

void	get_transforming_r_and_t (BasepairState const &o_state, BasepairState &r_state)

void	get_transformed_state (BasepairState const &o_state, BasepairState &r_state)

void	flip ()

float	diff (BasepairStateOP const &state)

float	_rot_diff (BasepairStateOP const &state)

String const	to_str () const

const Point &	d ()

const Point &	d () const

const Matrix &	r ()

const Matrix &	r () const

const Matrix &	r_T ()

const Matrix &	r_T () const

const Points &	sugars ()

const Points &	sugars () const

void	d (Point const &newd)

void	r (Matrix const &newr)

void	sugars (Points const &newsug)

void	set (BasepairState const &nstate_)

The documentation for this class was generated from the following file:

Public Member Functions